ShardingWriter

Full name SMRUCC.genomics.Analysis.Metagenome.Kmers.ShardingWriter Assembly SMRUCC.genomics.Analysis.Metagenome Members 8

01 Syntax

SMRUCC.genomics.Analysis.Metagenome.Kmers.ShardingWriter

02 Methods

Name	Overloads	Summary
Add	1	add batch data into k-mer database.
FlushBatchData	1	flush current batch of the in-memory kmer cache data into file
FlushData	1	flush kmer cache data into file and then update the index data
Union	1
SerializeToBuffer	1
Dispose	1

03 Fields

Name	Overloads	Summary
cache	1	in-memory data cache of the kmer database file
reader	1	reader of the kmer data

04 Members

method Add #

Add(IEnumerable(Of KmerSeed))

add batch data into k-mer database.

Parameters

Name	Type	Description
`batch`	`IEnumerable(Of KmerSeed)`	-

method FlushBatchData #

FlushBatchData

flush current batch of the in-memory kmer cache data into file

method FlushData #

FlushData

flush kmer cache data into file and then update the index data

field cache #

cache

in-memory data cache of the kmer database file

field reader #

reader

reader of the kmer data

method Union #

method SerializeToBuffer #

SerializeToBuffer(KmerSeed)

method Dispose #

Dispose()