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API Docs / SMRUCC.genomics.Analysis.Metagenome / File

File

Full name SMRUCC.genomics.Analysis.Metagenome.Settings.File Assembly SMRUCC.genomics.Analysis.Metagenome Members 8

01 Syntax

SMRUCC.genomics.Analysis.Metagenome.Settings.File

02 Properties

NameOverloadsSummary
BlastBin 1 Blast程序组所在的文件夹
Mothur 1 The mothur program configuration.
R_HOME 1 The R program install location on your computer.
RepositoryRoot 1 The root directory for stores the GCModeller database such as fasta sequence for annotation.
Perl 1 External hybrid programming with bio-perl.
ShoalShell 1 有一些时候需要进行批量计算的时候,可能会在程序的内部释放出脚本重新调用Shoal进行计算
MySQL 1 Connection paramenter to the model data server.
DefaultXmlFile 1 配置文件的默认文件位置为AppData文件夹之中

03 Members

property BlastBin #
BlastBin

Blast程序组所在的文件夹

property Mothur #
Mothur

The mothur program configuration.

property R_HOME #
R_HOME

The R program install location on your computer. This property value is the directory path value like: D:\R\bin or C:\Program Files\R\bin

property RepositoryRoot #
RepositoryRoot

The root directory for stores the GCModeller database such as fasta sequence for annotation.

property Perl #
Perl

External hybrid programming with bio-perl.

property ShoalShell #
ShoalShell

有一些时候需要进行批量计算的时候,可能会在程序的内部释放出脚本重新调用Shoal进行计算

property MySQL #
MySQL

Connection paramenter to the model data server. (连接至存放模型数据的服务器的MySQL连接参数)

property DefaultXmlFile #
DefaultXmlFile

配置文件的默认文件位置为AppData文件夹之中

Remarks

2017-1-26

配置文件数据原来是放置在应用程序的根目录之下的,但是考虑到将程序拷贝到不同的计算机之上, 环境已经变化了,则放置于应用程序的根目录之中的话,会覆盖掉其他计算机的环境配置,所以 最终决定放置于AppData之中