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API Docs / SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.MotifFinder / ChiSquare

ChiSquare

Full name SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.Motif.EmMotif.Core.ChiSquare Assembly SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.MotifFinder Members 4

01 Syntax

SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.Motif.EmMotif.Core.ChiSquare

02 Methods

NameOverloadsSummary
GammaQ 1 正则化上不完全伽马 Q(s, x)
ChiSquareSf 1 χ² 生存函数 P(X ≥ x),df 自由度
GammaLn 1 log Γ(x)(Lanczos 近似)
MotifEValue 1 E-value = 候选窗口总数 × χ²p 值。[em.md §9] E < 0.05 视为显著。

03 Members

method GammaQ #
GammaQ(Double, Double)

正则化上不完全伽马 Q(s, x)

method ChiSquareSf #
ChiSquareSf(Double, Double)

χ² 生存函数 P(X ≥ x),df 自由度

method GammaLn #
GammaLn(Double)

log Γ(x)(Lanczos 近似)

method MotifEValue #
MotifEValue(Double, Double, Double)

E-value = 候选窗口总数 × χ²p 值。[em.md §9] E < 0.05 视为显著。