LociFilter

Full name SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.LociFilter Assembly SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns Members 3

01 Syntax

SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.LociFilter

02 Methods

Name	Overloads	Summary
Filtering	1	筛选有效的重复片段位点
doFiltering	1
FilteringRev	1	根据ReverseRepeatsView.reversed来进行筛选

03 Members

method Filtering #

Filtering``1(IEnumerable(Of ``0), Int32, Compares, Boolean, Int32)

筛选有效的重复片段位点

Type Parameters

Name	Description
`T`

Parameters

Name	Type	Description
`data`	IEnumerable(Of ``0)	-
`interval`	`Int32`	-
`compare`	Compares	-
`returnsAll`	`Boolean`	-

method doFiltering #

doFiltering``1(IEnumerable(Of ``0), Func(Of ``0, Int32()), Action(Of ``0, Int32()), Int32, Compares, Boolean, Int32)

Type Parameters

Name	Description
`T`

Parameters

Name	Type	Description
`data`	IEnumerable(Of ``0)	-
`getLocis`	Func(Of ``0, Int32())	-
`setLocis`	Action(Of ``0, Int32())	-
`interval`	`Int32`	-
`compare`	Compares	-
`returnsAll`	`Boolean`	-
`lengthMin`	`Int32`	重复片段的最小长度

method FilteringRev #

FilteringRev(IEnumerable(Of ReverseRepeatsView), Int32, Compares, Boolean, Int32)

根据ReverseRepeatsView.reversed来进行筛选

Parameters

Name	Type	Description
`data`	`IEnumerable(Of ReverseRepeatsView)`	-
`interval`	`Int32`	-
`compare`	Compares	-
`returnsAll`	`Boolean`	-