nuget
Regular expression model for the motifs
MotifPattern
01 Syntax
SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.Motif.MotifPattern
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| Scan | 1 | scan the motif sites on a given sequence data |
03 Properties
| Name | Overloads | Summary |
|---|---|---|
| Id | 1 | the unique reference id key of current motif pattern |
| Expression | 1 | the regular expression for search the sequence site |
| Motif | 1 | the motif name |
| Width | 1 | the width of current motif(site length) |
04 Members
Scan(
Scanner)scan the motif sites on a given sequence data
Parameters
| Name | Type | Description |
|---|---|---|
scanner | Scanner | - |
Id
the unique reference id key of current motif pattern
Expression
the regular expression for search the sequence site
Motif
the motif name
Width
the width of current motif(site length)