nuget
直接从基因的启动子区选取序列数据以及外加操纵子的第一个基因的启动子序列
PromoterRegionParser
01 Syntax
SMRUCC.genomics.ContextModel.Promoter.PromoterRegionParser
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| .ctor | 1 | 基因组的Fasta核酸序列 |
| GetSequenceById | 2 | Get parsed sequence by a given id list. |
| ContainsLength | 1 | If length is 160, then it will be invalid, check if the input length is valids? |
| GetRegionCollectionByLength | 1 |
03 Properties
| Name | Overloads | Summary |
|---|---|---|
| PrefixLengths | 1 | |
| PromoterRegions | 1 |
04 Members
基因组的Fasta核酸序列
Parameters
| Name | Type | Description |
|---|---|---|
nt | FastaSeq | 全基因组序列 |
Get parsed sequence by a given id list.
Parameters
| Name | Type | Description |
|---|---|---|
parser | PromoterRegionParser | - |
geneIDs | IEnumerable(Of String) | - |
length | PrefixLength | - |
ContainsLength(
Int32)If length is 160, then it will be invalid, check if the input length is valids?
Parameters
| Name | Type | Description |
|---|---|---|
length | Int32 | - |
PrefixLengths
PromoterRegions
GetRegionCollectionByLength(
Int32)GetSequenceById(
IEnumerable(Of String), Int32)