EntryAPI

Full name SMRUCC.genomics.Assembly.KEGG.DBGET.bGetObject.Organism.EntryAPI Assembly SMRUCC.genomics.Core Members 10

01 Syntax

SMRUCC.genomics.Assembly.KEGG.DBGET.bGetObject.Organism.EntryAPI

02 Methods

Name	Overloads	Summary
GetValue	1	Gets the organism value from the KEGG database through the brief code, if the data is not exists in the database, Nothing will be returns.
GetKEGGSpeciesCode	1	通过本地资源从基因组全名之中得到KEGG之中的三字母的简写代码
GetOrganismListFromResource	1	Load KEGG organism list from the internal resource.
fillTaxonomyClass	1	从上往下填充物种分类信息
FromResource	1	Data from the external resources.

03 Properties

Name	Overloads	Summary
Resources	1

04 Fields

05 Members

method GetValue #

GetValue(String)

Gets the organism value from the KEGG database through the brief code, if the data is not exists in the database, Nothing will be returns.

Parameters

Name	Type	Description
`sp`	`String`	The organism brief code in the KEGG database

method GetKEGGSpeciesCode #

GetKEGGSpeciesCode(String)

通过本地资源从基因组全名之中得到KEGG之中的三字母的简写代码

Parameters

Name	Type	Description
`Name`	`String`	-

method GetOrganismListFromResource #

GetOrganismListFromResource

Load KEGG organism list from the internal resource.

method fillTaxonomyClass #

fillTaxonomyClass(IEnumerable(Of Organism))

从上往下填充物种分类信息

Parameters

Name	Type	Description
`eukaryotes`	`IEnumerable(Of Organism)`	-

method FromResource #

FromResource(String)

Data from the external resources.

Parameters

Name	Type	Description
`url`	`String`	By default is fetch from kegg web server for gets the latest KEGG organism list from query the KEGG database.

field OrgCodes #

OrgCodes

{brief_sp, Organism}

field WEB_URL #

WEB_URL

field DELIMITER #

DELIMITER

field CELL #

CELL

property Resources #

Resources