nuget
The blast+ program alignment output log file analysis module. (blast+程序的序列比对日志输出文件的分析模块)
DomnArch
01 Syntax
SMRUCC.genomics.Assembly.NCBI.CDD.Blastp.DomnArch
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| Save | 1 | Save the domain architecture model into a xml file. |
| Parse | 1 | Parsing a blastp output log file and get the protein domains. |
| Load | 1 | Restore a domain architecture model from a xml file. |
| op_Implicit | 1 | Read the out put log file from a specific file. |
03 Fields
| Name | Overloads | Summary |
|---|---|---|
| Protein | 1 | |
| Domains | 1 | |
| REGX_SPLIT | 1 |
04 Members
Save(
String)Save the domain architecture model into a xml file. (将本蛋白质的结构域模型保存为一个XML文件)
Parameters
| Name | Type | Description |
|---|---|---|
XmlFile | String | - |
Parse(
String)Parsing a blastp output log file and get the protein domains. (通过分析一个BLASTP分析得到的报告文件而获取一个蛋白质的结构数据)
Parameters
| Name | Type | Description |
|---|---|---|
LogFile | String | The path of the target log file.(目标日志文件的文件路径) |
Load(
String)Restore a domain architecture model from a xml file. (从一个XML文件之中读取一个蛋白质结构域模型)
Parameters
| Name | Type | Description |
|---|---|---|
XmlFile | String | - |
op_Implicit(
String)Read the out put log file from a specific file. (从日个指定的文件之中读取输出日志，进而进行下一步的分析)
Parameters
| Name | Type | Description |
|---|---|---|
File | String | The path of the log file.(目标日志文件的文件路径) |
Protein
Domains
REGX_SPLIT