nuget
External annotation map to go term. The reference links between the Go database and other biological database. (Go数据库和其他的生物学数据库的相互之间的外键连接)
toGO
01 Syntax
SMRUCC.genomics.Data.GeneOntology.Annotation.xref2go.toGO
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| ParseAnnotation | 1 | |
| ToString | 1 | |
| ParseAnnotation | 1 | |
| Parse2GO | 1 |
03 Properties
| Name | Overloads | Summary |
|---|---|---|
| entry | 1 | Annotation entry id, example as pfamId. |
| name | 1 | The common name of the target toGO.entry |
| map2GO_term | 1 | The name of the go term |
| map2GO_id | 1 | The mapped go term id |
04 Members
ParseAnnotation``1(
XrefIdTypes)Type Parameters
| Name | Description |
|---|---|
T |
Parameters
| Name | Type | Description |
|---|---|---|
type | XrefIdTypes | COG/EC/MetaCyc/KEGG/Pfam/Reactome/SMART etc. |
entry
Annotation entry id, example as pfamId. (请注意，一个entry可能会map到好几个go term上面)
name
The common name of the target toGO.entry
map2GO_term
The name of the go term
Remarks
The go function annotation
map2GO_id
The mapped go term id
ToString()
ParseAnnotation(
XrefIdTypes)Parse2GO(
String)