nuget
protein network data (incl. subscores per channel); commercial entities require a license.
linksDetail
01 Syntax
SMRUCC.genomics.Data.STRING.Tabular.Tsv.linksDetail
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| LoadFile | 1 | parse the string-db table file |
| IteratesLinks | 1 | 9606.protein.links.v10.txt，这个文件之中只有3个值：a, b以及分数 |
| Selects | 1 | |
| ToString | 1 |
03 Properties
| Name | Overloads | Summary |
|---|---|---|
| protein1 | 1 | |
| protein2 | 1 | |
| neighborhood | 1 | |
| neighborhood_transferred | 1 | |
| fusion | 1 | |
| cooccurence | 1 | |
| homology | 1 | |
| coexpression | 1 | |
| coexpression_transferred | 1 | |
| experiments | 1 | |
| experiments_transferred | 1 | |
| database_transferred | 1 | |
| textmining_transferred | 1 | |
| experimental | 1 | |
| database | 1 | |
| textmining | 1 | |
| combined_score | 1 |
04 Members
LoadFile(
String)parse the string-db table file
Parameters
| Name | Type | Description |
|---|---|---|
path | String | the string db protein links data files, example like:
|
IteratesLinks(
String)9606.protein.links.v10.txt，这个文件之中只有3个值：a, b以及分数
Parameters
| Name | Type | Description |
|---|---|---|
path$ | String | - |
Selects(
IEnumerable(Of EntityObject), IEnumerable(Of linksDetail), Dictionary(Of String, String))Parameters
| Name | Type | Description |
|---|---|---|
source | IEnumerable(Of EntityObject) | - |
maps | IEnumerable(Of linksDetail) | - |
protein1
protein2
neighborhood
neighborhood_transferred
fusion
cooccurence
homology
coexpression
coexpression_transferred
experiments
experiments_transferred
database_transferred
textmining_transferred
experimental
database
textmining
combined_score
ToString()