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API Docs / SMRUCC.genomics.Data.STRING-db

SMRUCC.genomics.Data.STRING-db 1.0.9762.7562.

Namespaces 5 Types 20 Members 81

01 Namespaces

SMRUCC.genomics.Data.STRING

TypeSummary Members
Extensions 2
PSI PSI network file extensions API. 0
StringIndex network index for the linksDetail 4

SMRUCC.genomics.Data.STRING.StringDB.WebAPI

TypeSummary Members
Database 13
Request 25

SMRUCC.genomics.Data.STRING.StringDB.WebAPI.Request.Parameter

TypeSummary Members
additional_network_nodes Number of additional nodes in network (ordered by score), e.g./ 10 0
caller_identity Your identifier for us. 0
format + For resolve requests: only-ids get the list of only the STRING identifiers (full by default) + For abstract requests: use colon pmids for alternative shapes of the pubmed ident… 0
identifier required parameter for single item, e.g. 0
identifiers required parameter for multiple items, e.g.DRD1_HUMAN%0DDRD2_HUMAN 0
limit Maximum number of nodes to return, e.g 10. 0
network_flavor The style of edges in the network. 0
required_score Threshold of significance to include a interaction, a number between 0 and 1000 0
species Taxon identifiers (e.g. 0

SMRUCC.genomics.Data.STRING.Tabular

TypeSummary Members
PitrNode STRING网络的Csv数据文件存储 1

SMRUCC.genomics.Data.STRING.Tabular.Tsv

TypeSummary Members
Coordinates Tsv table reader for string-db export result string_network_coordinates.txt. 0
entrez_gene_id_vs_string separate identifier mapping files, for several frequently used name_spaces... 5
InteractExports 对于linkAction和linksDetail而言，都是从ftp服务器上面下载的结果数据 这个tsv文件则是搜索蛋白质网络结果之后的export下载数据的文件格式读取对象 3
linkAction interaction types for protein links. 7
linksDetail protein network data (incl. 21