DEGModel

Full name SMRUCC.genomics.GCModeller.Workbench.ExperimentDesigner.DEGModel Assembly SMRUCC.genomics.GCModeller.Workbench.ExperimentDesigner Members 9

A generic model for different expression molecule

01 Syntax

SMRUCC.genomics.GCModeller.Workbench.ExperimentDesigner.DEGModel

02 Methods

Name	Overloads	Summary
ToString	1

03 Properties

Name	Overloads	Summary
label	1	usually be the gene id
t	1	t stats value
pvalue	1	The p-value of the differential expression test
VIP	1	Variance importance(used in metabolomics data)
nLog10p	1	log10(p-value)
logFC	1
fdr	1
class	1

04 Members

property label #

label

usually be the gene id

property t #

t stats value

property pvalue #

pvalue

The p-value of the differential expression test

Remarks

This is the p-value before multiple testing correction.

property VIP #

VIP

Variance importance(used in metabolomics data)

property nLog10p #

nLog10p

-log10(p-value)

property logFC #

logFC

property fdr #

fdr

property class #

class

method ToString #

ToString()