nuget
功能富集网络
FunctionalEnrichmentNetwork
01 Syntax
SMRUCC.genomics.Model.Network.STRING.FunctionalEnrichmentNetwork
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| StringUniprot | 1 | Using string-db ID as the uniprot data index key |
| BuildModel | 1 | |
| RenderDEGsColor | 1 |
03 Members
StringUniprot(
IEnumerable(Of entry))Using string-db ID as the uniprot data index key
Parameters
| Name | Type | Description |
|---|---|---|
uniprot | IEnumerable(Of entry) | - |
BuildModel(
IEnumerable(Of InteractExports), Dictionary(Of String, entry), Dictionary(Of String, String))Parameters
| Name | Type | Description |
|---|---|---|
interacts | IEnumerable(Of InteractExports) | - |
uniprot | Dictionary(Of String, entry) | - |
groupValues | Dictionary(Of String, String) | 进行Node分组所需要的group信息来源 |
RenderDEGsColor(
NetworkGraph, ValueTuple(Of String(), String()), ValueTuple(Of Brush, Brush), String)Parameters
| Name | Type | Description |
|---|---|---|
model | NetworkGraph | 是以STRING的蛋白编号为标识符的，所以在这里还需要使用uniprot的数据进行转换 |
DEGs | ValueTuple(Of String(), String()) | uniprot蛋白编号 |
colors | ValueTuple(Of Brush, Brush) | - |