Extensions

Full name SMRUCC.genomics.Model.Network.VirtualFootprint.Extensions Assembly SMRUCC.genomics.Model.Network.VirtualFootprint Members 3

01 Syntax

SMRUCC.genomics.Model.Network.VirtualFootprint.Extensions

02 Methods

03 Members

method MergeLocis #

MergeLocis(IEnumerable(Of SimpleSegment), Int32, Func(Of SimpleSegment, Int32), Func(Of SimpleSegment, String))

将相邻的位点进行合并

Remarks

Id和距离是使用一些方法来读取的，例如SimpleSegment.ID是ID:Dist这种形式的话，就可以分别分离出编号和记录数据

Parameters

Name	Type	Description
`source`	`IEnumerable(Of SimpleSegment)`	假设都是同一条链上面的
`offset`	`Int32`	-
`getDist`	`Func(Of SimpleSegment, Int32)`	-
`getTag`	`Func(Of SimpleSegment, String)`	-

method TrimStranded #

TrimStranded(IEnumerable(Of SimpleSegment), PTT, Func(Of SimpleSegment, String))

筛选出和标记的基因相同的链方向的位点数据

Parameters

Name	Type	Description
`sites`	`IEnumerable(Of SimpleSegment)`	-
`genome`	`PTT`	-
`getId`	`Func(Of SimpleSegment, String)`	-

method uid #