SMRUCC.genomics.Analysis.HTS.GSEA.KnowledgeBase.Extensions 1.0.9762.7562.

Namespaces 3 Types 9 Members 19

01 Namespaces

SMRUCC.genomics.Analysis.HTS.GSEA.KnowledgeBase

An extension module about create GSEA background

Type	Summary	Members
BBHLibrary	Module for create GSEA background model from bbh annotation result.	1
KEGGCompounds	Create background model for KEGG pathway enrichment based on the kegg metabolites, used for LC-MS metabolism data analysis.	2
MultipleOmics	helper for create enrichment background model for multiple omics data analysis	2

SMRUCC.genomics.Analysis.HTS.GSEA.KnowledgeBase.Metabolism

Type	Summary	Members
EnrichmentNetwork	Model of network based enrichment analysis(KEGG pathway targetted)	4

SMRUCC.genomics.Analysis.HTS.GSEA.KnowledgeBase.Metabolism.Metpa

Type	Summary	Members
graph		1
metpa	metpa symbol	2
mset	a molecule collection	3
msetList	the molecule collection for each pathway cluster	0
Topologys	the network graph topology impact score algorithm	4