KmersDatabase

Full name SMRUCC.genomics.Analysis.Metagenome.Kmers.KmersDatabase Assembly SMRUCC.genomics.Analysis.Metagenome Members 7

01 Syntax

SMRUCC.genomics.Analysis.Metagenome.Kmers.KmersDatabase

02 Methods

Name	Overloads	Summary
LoadIntoMemory	1	try to load all data into memory, make fast debug test for the small database
GetKmer	1
SequenceToTaxonomyId	1
SequenceInfomation	1
Dispose	1

03 Properties

Name	Overloads	Summary
k	1

04 Fields

Name	Overloads	Summary
prefixSize	1

05 Members

method LoadIntoMemory #

LoadIntoMemory

try to load all data into memory, make fast debug test for the small database

method GetKmer #

GetKmer(String, Boolean)

Parameters

Name	Type	Description
`kmer`	`String`	-

Returns

return nothing means target kmer is not exists inside the database.

field prefixSize #

prefixSize

property k #

method SequenceToTaxonomyId #

SequenceToTaxonomyId(UInt32)

method SequenceInfomation #

SequenceInfomation(UInt32)

method Dispose #

Dispose()