Polypeptide

Full name SMRUCC.genomics.SequenceModel.Polypeptides.Polypeptide Assembly SMRUCC.genomics.Core Members 8

Protein polypeptide sequence.

00 Remarks

(蛋白质多肽链的一些相关操作)

01 Syntax

SMRUCC.genomics.SequenceModel.Polypeptides.Polypeptide

02 Methods

Name	Overloads	Summary
ConstructVector	1	将蛋白质序列字符串转换为氨基酸残基的向量
ToString	1	Convert AminoAcid enum values to character string
Generate	1	Generate all polypeptide sequence with given length
GetCompositionVector	1	Get the composition vector of this polypeptide sequence.

03 Properties

Name	Overloads	Summary
ToChar	1	值的氨基酸字符都是大写的
ToEnums	1	键名字符应该是大写的字母
MEGASchema	1	Protein sequence display color schema from MEGA software.
Abbreviate	1	大小写不敏感

04 Members

method ConstructVector #

ConstructVector(String)

将蛋白质序列字符串转换为氨基酸残基的向量

Parameters

Name	Type	Description
`prot$`	`String`	-

method ToString #

ToString(IEnumerable(Of AminoAcid))

Convert AminoAcid enum values to character string

Parameters

Name	Type	Description
`aa`	`IEnumerable(Of AminoAcid)`	-

method Generate #

Generate(Int32)

Generate all polypeptide sequence with given length

Parameters

Name	Type	Description
`len`	`Int32`	-

method GetCompositionVector #

GetCompositionVector(Char())

Get the composition vector of this polypeptide sequence.

Parameters

Name	Type	Description
`seq`	`Char()`	全部必须为大写字母

property ToChar #

ToChar

值的氨基酸字符都是大写的

property ToEnums #

ToEnums

键名字符应该是大写的字母

property MEGASchema #

MEGASchema

Protein sequence display color schema from MEGA software.

Remarks

(MEGA软件的显示蛋白质序列的残基颜色)

property Abbreviate #

Abbreviate

大小写不敏感