nuget
Taxonomy names file (names.dmp):
- tax_id -- the id of node associated with this name
- name_txt -- name itself
- unique name -- the unique Variant Of this name If name Not unique
- name Class -- (Of synonym, common name, ...)
names
01 Syntax
SMRUCC.genomics.Assembly.NCBI.Taxonomy.names
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| FileParser | 1 | Parsering data from names.dmp |
| BuildTaxiIDFinder | 1 | Helper function for NcbiTaxonomyTree, which is required of taxid for build tree. |
| ToString | 1 |
03 Properties
| Name | Overloads | Summary |
|---|---|---|
| tax_id | 1 | the id Of node associated With this name |
| name_txt | 1 | name itself |
| unique_name | 1 | the unique Variant Of this name If name Not unique |
| name_class | 1 | (Of synonym, common name, ...) |
04 Members
FileParser(
String)Parsering data from names.dmp
Parameters
| Name | Type | Description |
|---|---|---|
dump$ | String |
|
BuildTaxiIDFinder(
String)Helper function for NcbiTaxonomyTree, which is required of taxid for build tree.
Parameters
| Name | Type | Description |
|---|---|---|
dump$ | String | - |
tax_id
-- the id Of node associated With this name
name_txt
-- name itself
unique_name
-- the unique Variant Of this name If name Not unique
name_class
-- (Of synonym, common name, ...)
ToString()