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API Docs / SMRUCC.genomics.Interops.NCBI.Extensions / AlignmentTable

AlignmentTable

Full name SMRUCC.genomics.Interops.NCBI.Extensions.NCBIBlastResult.WebBlast.AlignmentTable Assembly SMRUCC.genomics.Interops.NCBI.Extensions Members 10

01 Syntax

SMRUCC.genomics.Interops.NCBI.Extensions.NCBIBlastResult.WebBlast.AlignmentTable

02 Methods

NameOverloadsSummary
DescriptionSubstituted 1 按照GI编号进行替换
DescriptionSubstituted2 1 按照基因组编号进行替换
Save 1 Save as XML
ToString 1

03 Properties

NameOverloadsSummary
Query 1 The query fasta file name or NCBI sequence accession id
RID 1 NCBI blast task id
Database 1 Selected NCBI blast sequence database name
Hits 1 The alignment result
Program 1
Iteration 1

04 Members

method DescriptionSubstituted #
DescriptionSubstituted(gbEntryBrief())

按照GI编号进行替换

Parameters
NameTypeDescription
InfogbEntryBrief()

-

method DescriptionSubstituted2 #
DescriptionSubstituted2(gbEntryBrief())

按照基因组编号进行替换

Parameters
NameTypeDescription
InfogbEntryBrief()

-

method Save #
Save(String, Encoding)

Save as XML

Parameters
NameTypeDescription
PathString

-

encodingEncoding

-

property Query #
Query

The query fasta file name or NCBI sequence accession id

property RID #
RID

NCBI blast task id

property Database #
Database

Selected NCBI blast sequence database name

property Hits #
Hits

The alignment result

property Program #
Program
property Iteration #
Iteration
method ToString #
ToString()