SimilarDiscriptions

Full name SMRUCC.genomics.Analysis.SequenceTools.DNA_Comparative.DeltaSimilarity1998.SimilarDiscriptions Assembly SMRUCC.genomics.Analysis.SequenceTools.DNA_Comparative Members 12

For convenience, we describe levels of sigma-differences for some reference examples (all values mutliplied by 1000)

01 Syntax

SMRUCC.genomics.Analysis.SequenceTools.DNA_Comparative.DeltaSimilarity1998.SimilarDiscriptions

02 Fields

Name	Overloads	Summary
Close	2	(sigma <= 50; pervasively within species, human vs cow, Lactococcus lactis vs Streptococcus pyogenes).
ModeratelySimilar	2	(55 <= sigma <= 85; human vs chicken, Escherichia coli vs Haemophilus influenzae, Synechococcus vs Anabaena).
WeaklySimilar	2	(90 <= sigma <= 120; human vs sea urchin, M.
DistantlySimilar	2	(125 <= sigma <= 145; human vs Sulfolobus, E.
Distant	2	(150 <= sigma <= 180; human vs Drosophilia, E.
VeryDistant	2	(sigma >= 190; human vs E.

03 Members

field Close #

(sigma <= 50; pervasively within species, human vs cow, Lactococcus lactis vs Streptococcus pyogenes).

field ModeratelySimilar #

ModeratelySimilar

(55 <= sigma <= 85; human vs chicken, Escherichia coli vs Haemophilus influenzae, Synechococcus vs Anabaena).

field WeaklySimilar #

WeaklySimilar

(90 <= sigma <= 120; human vs sea urchin, M. genitalium vs M. pneumoniae).

field DistantlySimilar #

DistantlySimilar

(125 <= sigma <= 145; human vs Sulfolobus, E. coli vs R. prowazekii, M. jannaschii vs M. thermoautotrophicum).

field Distant #

Distant

(150 <= sigma <= 180; human vs Drosophilia, E. coli vs Helicobacter pylori).

field VeryDistant #

VeryDistant

(sigma >= 190; human vs E. coli, E. coli vs Sulfolobus, M. jannaschii vs Halobacterium).

field Close overload 2 #

field ModeratelySimilar overload 2 #

ModeratelySimilar

field WeaklySimilar overload 2 #

WeaklySimilar

field DistantlySimilar overload 2 #

DistantlySimilar

field Distant overload 2 #

Distant

field VeryDistant overload 2 #

VeryDistant