nuget server logo nuget api documents
↑

API Docs / SMRUCC.genomics.Core / Promoter

Promoter

Full name SMRUCC.genomics.Assembly.MetaCyc.File.DataFiles.Slots.Promoter Assembly SMRUCC.genomics.Core Members 9

Frames in this class define transcription start sites. (本对象定义了一个转录起始位点)

00 Remarks

启动子(promoter)是基因的一个组成部分,在遗传学中是指一段能使基因进行转录的脱氧核糖核酸(DNA)序列。 启动子可以被RNA聚合酶辨认,并开始转录。在核糖核酸(RNA)合成中,启动子可以和决定转录的开始的转录因子 产成相互作用,控制基因表达(转录)的起始时间和表达的程度,包含核心启动子区域和调控区域,就像“开关”, 决定基因的活动,继而控制细胞开始生产哪一种蛋白质。 启动子本身并无编译功能,但它拥有对基因翻译氨基酸的指挥作用,就像一面旗帜,其核心部分是非编码区上游的 RNA聚合酶结合位点,指挥聚合酶的合成,这种酶指导RNA的复制合成。因此该段位的启动子发生突变(变异), 将对基因的表达有着毁灭性作用。

01 Syntax

SMRUCC.genomics.Assembly.MetaCyc.File.DataFiles.Slots.Promoter

02 Properties

NameOverloadsSummary
AbsolutePlus1Pos 1 The absolute base pair position of the transcription start site on the DNA strand.
BindsSigmaFactor 1 This slot links to the one or more sigma factors that can bind to a promoter, thereby initiating transcription.
ComponentOf 1 This slot links to the transcription-unit(s) to which the promoter belongs.
Minus35Left 1 These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.
Minus35Right 1 These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.
Minus10Left 1 These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.
Minus10Right 1 These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.
Direction 1 1 这个启动子序列是位于互补链的; 0 无法判断; 1 这个启动子序列是位于正链的.
Table 1

03 Members

property AbsolutePlus1Pos #
AbsolutePlus1Pos

The absolute base pair position of the transcription start site on the DNA strand. (本转录起始位点在DNA链上面的碱基位置)

property BindsSigmaFactor #
BindsSigmaFactor

This slot links to the one or more sigma factors that can bind to a promoter, thereby initiating transcription. (本属性链接至1至多个可以与本启动子相结合的Sigma因子,然后启动转录过程)

property ComponentOf #
ComponentOf

This slot links to the transcription-unit(s) to which the promoter belongs.

property Minus35Left #
Minus35Left

These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter. (本属性列举了-35和-10区的位置)

property Minus35Right #
Minus35Right

These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.

property Minus10Left #
Minus10Left

These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.

property Minus10Right #
Minus10Right

These slots list chromosomal coordinates of the left and right ends of the -35 and -10 boxes associated with the promoter.

property Direction #
Direction

-1 这个启动子序列是位于互补链的; 0 无法判断; 1 这个启动子序列是位于正链的.

Remarks

左端小于右端,在正链,反之在互补链

property Table #
Table