nuget
The class of all proteins is divided into two subclasses: protein complexes and polypeptides. A polypeptide is a single amino acid chain produced from a single gene. A protein complex is a multimeric aggregation of more than one polypeptide subunit. A protein complex may in some cases have another protein complex as a component. Many of the slots that are applicable to Proteins are also applicable to members of the RNA class. (本类型的对象会枚举所有的Component对象的UniqueID)
Protein
00 Remarks
Protein表对象和ProtLigandCplxe表对象相比较： Protein表中包含有所有类型的蛋白质对象，而ProtLigandCplxe则仅包含有蛋白质和小分子化合物配合的之后所形成的复合物， 所以基因的产物在ProtLigandCplxe表中是无法找到的
01 Syntax
SMRUCC.genomics.Assembly.MetaCyc.File.DataFiles.Slots.Protein
02 Methods
| Name | Overloads | Summary |
|---|---|---|
| New | 1 | 返回一个新构造出来的Protein对象 |
| GetEnumerator | 1 | |
| GetEnumerator1 | 1 |
03 Properties
| Name | Overloads | Summary |
|---|---|---|
| ComponentOf | 1 | This slot lists the complex(es) that this protein is a component of, if any, including protein complexes, protein-small-molecule complexes, protein-RNA complexes, and so on. |
| DNAFootprintSize | 1 | For proteins that bind to DNA, the number of base pairs on the DNA strand that the binding protein covers. |
| GoTerms | 1 | Values of this slot are the Gene Ontology terms to which this object is annotated. |
| Locations | 1 | This slot describes the one or more cellular locations in which this protein is found. |
| ModifiedForm | 1 | This slot points from the unmodified form of a protein to one or more chemically modified forms of that protein. |
| MolecularWeightKD | 1 | This computed slot lists the known molecular weight(s) of a macromolecule by taking the union of the slots Molecular-Weight-Seq and Molecular-Weight-Exp. |
| MolecularWeightSeq | 1 | This slot lists the molecular weight of the protein complex or polypeptide, as derived from sequence data. |
| MolecularWeightExp | 1 | This slot lists the molecular weight of the protein complex or polypeptide, derived experimentally. |
| pI | 1 | This slot lists the pI of the polypeptide. |
| Regulates | 1 | For proteins that have regulatory activity (e.g. |
| Species | 1 | This slot is used in proteins only in the MetaCyc DB, in which case it identifies the species in which the current protein is found. |
| Catalyzes | 1 | A list of enzymatic reaction unique id that catalyzed by this protein.(本蛋白质所催化的酶促反应的UniqueId的列表) |
| UnmodifiedForm | 1 | This slot points from a chemically modified form of some protein, to the native unmodified form of that protein (e.g., from a phosphorylated form to the unphosphorylated form). |
| Gene | 1 | The gene's UniqueId that indicated that which gene codes this polypeptide. |
| IsModifiedProtein | 1 | 判断本蛋白质对象是否为经过化学修饰的蛋白质 |
| IsPolypeptide | 1 | 判断本蛋白质对象是否为一个多肽链对象 |
| Identifier | 1 | |
| CommonName | 1 | |
| Types | 1 | |
| Features | 1 | |
| Components | 1 | |
| Table | 1 |
04 Members
New
返回一个新构造出来的Protein对象
ComponentOf
This slot lists the complex(es) that this protein is a component of, if any, including protein complexes, protein-small-molecule complexes, protein-RNA complexes, and so on.
DNAFootprintSize
For proteins that bind to DNA, the number of base pairs on the DNA strand that the binding protein covers.
GoTerms
Values of this slot are the Gene Ontology terms to which this object is annotated. Each value should be annotated with citations, including evidence codes.
Locations
This slot describes the one or more cellular locations in which this protein is found. It’s values are members of the CCO (Cell Component Ontology) class.
ModifiedForm
This slot points from the unmodified form of a protein to one or more chemically modified forms of that protein. For example, the slot might point from the unmodified form of a polypeptide (or a protein complex) to a phosphorylated form of that polypeptide (or protein complex).
MolecularWeightKD
This computed slot lists the known molecular weight(s) of a macromolecule by taking the union of the slots Molecular-Weight-Seq and Molecular-Weight-Exp. Units: kilodaltons.
MolecularWeightSeq
This slot lists the molecular weight of the protein complex or polypeptide, as derived from sequence data. Units: kilodaltons.
MolecularWeightExp
This slot lists the molecular weight of the protein complex or polypeptide, derived experimentally. Multiple values of this slot correspond to multiple experimental observations. Units: kilodaltons.
pI
This slot lists the pI of the polypeptide.
Regulates
For proteins that have regulatory activity (e.g. as transcription factors), this slot points to the Regulation frames that describe the regulation and link to the regulated entity.
Species
This slot is used in proteins only in the MetaCyc DB, in which case it identifies the species in which the current protein is found.
Catalyzes
A list of enzymatic reaction unique id that catalyzed by this protein.(本蛋白质所催化的酶促反应的UniqueId的列表)
UnmodifiedForm
This slot points from a chemically modified form of some protein, to the native unmodified form of that protein (e.g., from a phosphorylated form to the unphosphorylated form).
Gene
The gene's UniqueId that indicated that which gene codes this polypeptide.
IsModifiedProtein
判断本蛋白质对象是否为经过化学修饰的蛋白质
IsPolypeptide
判断本蛋白质对象是否为一个多肽链对象
Identifier
CommonName
Types
Features
Components
Table
GetEnumerator()
GetEnumerator1()