PfamHit

Full name SMRUCC.genomics.Data.Xfam.Pfam.Pipeline.LocalBlast.PfamHit Assembly SMRUCC.genomics.Data.Xfam.Pfam Members 3

A hit model of pfam domain annotation on query protein sequence.

01 Syntax

SMRUCC.genomics.Data.Xfam.Pfam.Pipeline.LocalBlast.PfamHit

02 Properties

Name	Overloads	Summary
start	1	The start position of this domain object on target sequence
ends	1	The end position of this domain object on target sequence.
Pfam	1	经过BlastOutputParser的解析输出，不论是哪个方向的比对结果，输出的结果I_BlastQueryHit.HitName就是pfam的定义数据

03 Members

property start #

start

The start position of this domain object on target sequence

property ends #

ends

The end position of this domain object on target sequence.

property Pfam #

Pfam

经过BlastOutputParser的解析输出，不论是哪个方向的比对结果，输出的结果I_BlastQueryHit.HitName就是pfam的定义数据