Utils

Full name SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.Motif.Utils Assembly SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.MotifFinder Members 4

01 Syntax

SMRUCC.genomics.Analysis.SequenceTools.SequencePatterns.Motif.Utils

02 Methods

Name	Overloads	Summary
indexOfBase	1	ACGT
calcInformationContent	1

03 Fields

Name	Overloads	Summary
ACGT	2	char order aligned with Utils.indexOfBase())

04 Members

method indexOfBase #

indexOfBase(Char)

ACGT

Parameters

Name	Type	Description
`base`	`Char`	-

field ACGT #

ACGT

char order aligned with Utils.indexOfBase()

field ACGT overload 2 #

ACGT

method calcInformationContent #

calcInformationContent(Double, Int32())