HammingFilterSse

Full name SMRUCC.genomics.Analysis.SequenceAlignment.DIAMOND.HammingFilterSse Assembly SMRUCC.genomics.Analysis.SequenceAlignment Members 6

SSE2 向量化 Hamming 距离过滤器(48aa 窗口),实现 IHammingFilter 接口。

01 Syntax

SMRUCC.genomics.Analysis.SequenceAlignment.DIAMOND.HammingFilterSse

02 Methods

Name	Overloads	Summary
Distance	1
Pass	1

03 Fields

Name	Overloads	Summary
WindowSize	2	DIAMOND 默认初筛窗口大小(氨基酸数)。
MaxDistance	2	允许的最大 Hamming 距离(缩减字母表空间)。

04 Members

field WindowSize #

WindowSize

DIAMOND 默认初筛窗口大小(氨基酸数)。

field MaxDistance #

MaxDistance

允许的最大 Hamming 距离(缩减字母表空间)。

field MaxDistance overload 2 #

MaxDistance

field WindowSize overload 2 #

WindowSize

method Distance #

Distance(String, Int32, String, Int32)

method Pass #

Pass(String, Int32, String, Int32)